STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hycGNAD-dependent dehydrogenase subunit. (250 aa)    
Predicted Functional Partners:
hycE
NAD-dependent dehydrogenase subunit.
 
 
 0.999
hyfF
Hydrogenase-4 component F; High confidence in function and specificity.
 
 
 0.999
hycD
Formate hydrogenlyase subunit; High confidence in function and specificity.
 
 
 0.999
hyfB
Hydrogenase-4 component B; High confidence in function and specificity.
 
 
 0.999
sce1936
Putative NADH dehydrogenase; Family membership.
 
 
 0.998
phaA
pH adaptation potassium efflux protein PhaA; High confidence in function and specificity.
  
 
 0.998
mnhD
Putative Na(+)/H(+) antiporter subunit D; Family membership.
 
 
 0.991
phaD
pH adaption potassium efflux protein PhaD; Family membership.
  
 
 0.990
nuoC2
NADH dehydrogenase (ubiquinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.; Belongs to the complex I 30 kDa subunit family.
 
 0.990
nuoD2
NADH dehydrogenase (ubiquinone); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.; Belongs to the complex I 49 kDa subunit family.
 
 0.988
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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