STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce4837Put. Phosphoglucomutase/Phosphomannomutase; Specificity unclear. (591 aa)    
Predicted Functional Partners:
sce3719
Nucleotidyl transferase.
  
 
 0.931
manAC
Mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase; High confidence in function and specificity.
  
 
 0.931
hxk
Hxk protein; High confidence in function and specificity.
   
 
 0.925
manA
Mannose-6-phosphate isomerase; High confidence in function and specificity.
  
 
 0.924
algC
AlgC protein; High confidence in function and specificity.
     
 0.917
folP
Dihydropteroate synthase; Family membership.
  
  
 0.618
dacA
Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
   
 
 0.601
treZ
Malto-oligosyltrehalose trehalohydrolase; High confidence in function and specificity.
  
  
 0.541
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
  
 0.541
sce7170
Alpha-amylase-family protein; Family membership.
  
  
 0.541
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.