STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mhpTPermease of the major facilitator superfamily,putative 3-hydroxyphenylpropionate transporter; Specificity unclear. (399 aa)    
Predicted Functional Partners:
sce1223
Permease of the major facilitator superfamily; Specificity unclear.
  
   
 0.766
exuT
Permease of the major facilitator superfamily,probably glucarate/galactonate transport; Specificity unclear.
  
   
 0.666
mtbA
Permease of the major facilitator superfamily,putative sugar transporter; Specificity unclear.
  
   
 0.518
glcP
Permease of the major facilitator superfamily,probable glucose transporter; High confidence in function and specificity; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
  
   
 0.450
sce4896
Hypothetical protein; Belongs to the UPF0311 family.
       0.437
sce4897
Probable FAD-dependent monooxygenase.
       0.437
sce3982
Xenobiotic reductase A.
  
    0.415
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.