STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuDAlkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. (379 aa)    
Predicted Functional Partners:
ssuA
Aliphatic sulfonate ABC transporter, substrate-binding protein; High confidence in function and specificity.
 
 0.987
ssuE
FMN reductase; High confidence in function and specificity.
 
 0.984
ssuC
Aliphatic sulfonate ABC transporter, membrane protein; High confidence in function and specificity.
 
 0.970
ssuB
Aliphatic sulfonate ABC transporter, nucleotide binding/ATPase protein; High confidence in function and specificity.
 
 0.922
sce0165
ABC-type transporter substrate-binding protein; Specificity unclear.
 
 
 0.914
sce6912
Thiosulfate sulfurtransferase; High confidence in function and specificity.
  
  
  0.911
cysH
Phosphoadenylyl-sulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite.
   
 
 0.900
sce0166
ABC transporter permease protein; Specificity unclear.
 
 0.894
astR
Sulfate ester binding protein (ABC superfamily,peri_bind).
 
 
 0.894
sce1321
ABC transporter substrate-binding protein; Specificity unclear.
 
 
 0.890
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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