STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce4933Uncharacterized protein conserved in bacteria. (890 aa)    
Predicted Functional Partners:
sce4934
Uncharacterized protein conserved in bacteria.
 
    0.872
sce4930
Hypothetical protein.
 
    0.860
sce4932
Uncharacterized low-complexity proteins.
 
    
0.831
sce5662
Hypothetical protein.
 
    0.787
sce0103
Hypothetical protein.
 
    0.777
sce8471
Hypothetical protein.
  
     0.774
sce0908
Hypothetical protein.
  
     0.746
sce8030
Uncharacterized protein conserved in bacteria.
  
     0.740
sce8419
Hypothetical protein.
 
     0.739
sce8512
Uncharacterized protein conserved in bacteria.
  
     0.735
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.