STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce4935Predicted N-formylglutamate amidohydrolase; Family membership. (264 aa)    
Predicted Functional Partners:
hutI
Imidazolonepropionase; High confidence in function and specificity; Belongs to the metallo-dependent hydrolases superfamily. HutI family.
  
  
 0.792
mgpS
ATP-dependent helicase; High confidence in function and specificity.
  
     0.696
sdeB
Putative chlorohydrolase.
 
 
 0.665
sce7399
Putative metallo-dependent hydrolase; Family membership.
 
  
 0.639
sce6019
Amidohydrolase family protein; Family membership.
  
  
 0.590
sce6459
Putative amidohydrolase; Family membership.
  
  
 0.590
sce4936
Hypothetical protein predicted by Glimmer/Critica.
       0.554
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.509
gshA
Glutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.
  
     0.485
hutH
Histidine ammonia-lyase; High confidence in function and specificity; Belongs to the PAL/histidase family.
  
  
 0.478
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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