STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce4954Heat shock protein, Hsp20 family; Family membership; Belongs to the small heat shock protein (HSP20) family. (171 aa)    
Predicted Functional Partners:
sce0334
ATP-dependent Clp protease, ATP-binding subunit, two ATP-binding domains; Family membership.
 
 
 0.680
sce0335
ATPase with chaperone activity, two ATP-bindingdomains; Family membership.
 
 
 0.680
sce7162
ATP-dependent Clp protease, ATP-binding subunit,two ATP-binding domains; Family membership.
 
 
 0.680
sce4390
ATPase with chaperone activity, two ATP-bindingdomains; Family membership; Belongs to the ClpA/ClpB family.
 
 
 0.679
clpB2
ATPase with chaperone activity, two ATP-bindingdomains; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
 
 
 0.679
sce8441
Endopeptidase ATPase with chaperone activity,two ATP-bindingdomains; Family membership; Belongs to the ClpA/ClpB family.
 
 
 0.673
sce7923
ATPase with chaperone activity, two ATP-binding domains; Family membership; Belongs to the ClpA/ClpB family.
 
 
 0.669
clpA
Endopeptidase Clp; Family membership; Belongs to the ClpA/ClpB family.
 
 
 0.667
sce4955
Hypothetical protein predicted by Glimmer/Critica.
       0.572
sce9042
Pribosyltran domain-containing protein; Superfamily II DNA and RNA helicases.
 
  
 0.551
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.