STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce4982Uncharacterized protein conserved in bacteria. (163 aa)    
Predicted Functional Partners:
sce4981
Uncharacterized protein conserved in bacteria.
 
 
 0.995
sce1251
Uncharacterized protein conserved in bacteria.
 
 
 0.979
sce9341
Uncharacterized protein conserved in bacteria.
 
 
 0.979
sce4995
Hemolysin-coregulated protein (uncharacterized).
 
 
 0.966
sce4996
Hypothetical protein DUF 1316 domain.
 
  
 0.963
sce4846
Uncharacterized protein conserved in bacteria.
 
 
 0.962
sce4994
Hemolysin-coregulated protein (uncharacterized).
 
 
 0.959
sce4987
Uncharacterized protein conserved in bacteria.
 
  
 0.948
sce9346
Uncharacterized protein conserved in bacteria.
 
  
 0.930
sce4983
Uncharacterized protein conserved in bacteria.
 
  
 0.925
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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