STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce4983Uncharacterized protein conserved in bacteria. (562 aa)    
Predicted Functional Partners:
sce4998
Uncharacterized protein conserved in bacteria.
 
  
 0.954
sce4982
Uncharacterized protein conserved in bacteria.
 
  
 0.925
sce9337
Hypothetical protein; Function unclear.
 
  
 0.918
sce4981
Uncharacterized protein conserved in bacteria.
 
  
 0.907
sce4846
Uncharacterized protein conserved in bacteria.
 
  
 0.871
sce4996
Hypothetical protein DUF 1316 domain.
 
  
 0.863
sce4987
Uncharacterized protein conserved in bacteria.
 
  
 0.849
sce4995
Hemolysin-coregulated protein (uncharacterized).
 
  
 0.837
sce4994
Hemolysin-coregulated protein (uncharacterized).
 
  
 0.836
sce4997
Uncharacterized protein conserved in bacteria.
 
  
 0.834
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.