STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce4988Uncharacterized protein conserved in bacteria. (263 aa)    
Predicted Functional Partners:
sce4846
Uncharacterized protein conserved in bacteria.
 
  
 0.968
sce4986
Uncharacterized protein conserved in bacteria.
 
  
 0.947
sce4987
Uncharacterized protein conserved in bacteria.
 
  
 0.933
sce7699
Putative membrane protein.
 
  
 0.911
sce4985
Uncharacterized protein conserved in bacteria.
 
  
 0.893
sce9345
Hypothetical protein predicted by Glimmer/Critica.
 
  
 0.878
sce4998
Uncharacterized protein conserved in bacteria.
 
  
 0.846
sce4991
FHA domain protein.
 
  
 0.834
sce9342
Uncharacterized protein conserved in bacteria.
 
  
 0.834
sce4996
Hypothetical protein DUF 1316 domain.
 
  
 0.825
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (22%) [HD]