Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| clpA | mltD3 | sce4989 | sce4990 | Endopeptidase Clp; Family membership; Belongs to the ClpA/ClpB family. | Transglycosylase, Slt family. | 0.658 |
| clpA | sce4988 | sce4989 | sce4988 | Endopeptidase Clp; Family membership; Belongs to the ClpA/ClpB family. | Uncharacterized protein conserved in bacteria. | 0.695 |
| clpA | sce4991 | sce4989 | sce4991 | Endopeptidase Clp; Family membership; Belongs to the ClpA/ClpB family. | FHA domain protein. | 0.521 |
| lolA1 | mltD3 | sce5076 | sce4990 | Putative exported protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Transglycosylase, Slt family. | 0.511 |
| lolA1 | mreC | sce5076 | sce2409 | Putative exported protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.508 |
| lolA1 | sce1635 | sce5076 | sce1635 | Putative exported protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Integral membrane protein. | 0.844 |
| lolA1 | sce2860 | sce5076 | sce2860 | Putative exported protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Outer membrane protein, putative. | 0.593 |
| lolA1 | sce3782 | sce5076 | sce3782 | Putative exported protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Zn-ribbon protein possibly nucleic acid-binding. | 0.625 |
| lolA1 | tolR1 | sce5076 | sce0650 | Putative exported protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Putative transport transmembrane protein; Specificity unclear. | 0.533 |
| mltD3 | clpA | sce4990 | sce4989 | Transglycosylase, Slt family. | Endopeptidase Clp; Family membership; Belongs to the ClpA/ClpB family. | 0.658 |
| mltD3 | lolA1 | sce4990 | sce5076 | Transglycosylase, Slt family. | Putative exported protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.511 |
| mltD3 | mreC | sce4990 | sce2409 | Transglycosylase, Slt family. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.452 |
| mltD3 | rel | sce4990 | sce3845 | Transglycosylase, Slt family. | GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.443 |
| mltD3 | sce1635 | sce4990 | sce1635 | Transglycosylase, Slt family. | Integral membrane protein. | 0.468 |
| mltD3 | sce2860 | sce4990 | sce2860 | Transglycosylase, Slt family. | Outer membrane protein, putative. | 0.661 |
| mltD3 | sce3782 | sce4990 | sce3782 | Transglycosylase, Slt family. | Zn-ribbon protein possibly nucleic acid-binding. | 0.487 |
| mltD3 | sce4988 | sce4990 | sce4988 | Transglycosylase, Slt family. | Uncharacterized protein conserved in bacteria. | 0.453 |
| mltD3 | sce4991 | sce4990 | sce4991 | Transglycosylase, Slt family. | FHA domain protein. | 0.538 |
| mltD3 | tolR1 | sce4990 | sce0650 | Transglycosylase, Slt family. | Putative transport transmembrane protein; Specificity unclear. | 0.558 |
| mreC | lolA1 | sce2409 | sce5076 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Putative exported protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.508 |
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