STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce4994Hemolysin-coregulated protein (uncharacterized). (170 aa)    
Predicted Functional Partners:
sce4846
Uncharacterized protein conserved in bacteria.
 
 
 0.970
sce4982
Uncharacterized protein conserved in bacteria.
 
 
 0.959
sce4995
Hemolysin-coregulated protein (uncharacterized).
 
  
 
0.948
sce4981
Uncharacterized protein conserved in bacteria.
 
 
 0.939
sce1251
Uncharacterized protein conserved in bacteria.
 
 
 0.938
sce9340
Hemolysin-coregulated protein (uncharacterized).
  
  
 0.930
sce4996
Hypothetical protein DUF 1316 domain.
 
  
 0.899
sce4997
Uncharacterized protein conserved in bacteria.
 
  
 0.865
sce4998
Uncharacterized protein conserved in bacteria.
 
  
 0.843
sce9341
Uncharacterized protein conserved in bacteria.
 
 
 0.843
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.