Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
sce5006Putative Aldehyde dehydrogenase (NAD(+)); Family membership. (279 aa)    
Predicted Functional Partners:
sce2985
Putative Succinate-semialdehyde dehydrogenase (NAD(P)(+)); Family membership.
 
     0.966
sce4495
Putative Aldehyde dehydrogenase; Family membership; Belongs to the aldehyde dehydrogenase family.
 
     0.966
sce2164
Dehydrogenase; Family membership; Belongs to the aldehyde dehydrogenase family.
 
     0.965
deoC
Putative Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.
 
 0.951
sce3095
Putative aldehyde dehydrogenase; High confidence in function and specificity.
 
     0.950
sce5973
Succinate-semialdehyde dehydrogenase (NAD(P)(+)); High confidence in function and specificity.
 
     0.944
astD
Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
 
     0.938
mmsA
Methylmalonate-semialdehyde dehydrogenase.
 
    
0.925
sce2550
Aldehyde dehydrogenase; Specificity unclear; Belongs to the aldehyde dehydrogenase family.
 
    
0.916
rocA
1-pyrroline-5-carboxylate dehydrogenase; High confidence in function and specificity.
 
     0.846
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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