STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce5011Hypothetical protein. (83 aa)    
Predicted Functional Partners:
sce5012
Hypothetical protein.
 
     0.950
sce1131
Predicted nucleic acid-binding protein contains PIN domain.
 
     0.790
sce3137
Hypothetical protein predicted by Glimmer/Critica.
  
     0.762
sce5132
Hypothetical protein.
  
     0.762
sce5676
Hypothetical protein.
  
     0.762
sce6578
Hypothetical protein.
  
     0.762
sce9331
Hypothetical protein.
  
     0.762
sce7473
Hypothetical protein.
  
     0.761
sce4876
Hypothetical protein.
  
     0.746
sce4233
Hypothetical protein.
  
     0.711
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.