Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce5132Hypothetical protein. (108 aa)    
Predicted Functional Partners:
sce5011
Hypothetical protein.
  
     0.762
sce4876
Hypothetical protein.
  
     0.747
sce5587
Hypothetical protein.
  
     0.726
sce5012
Hypothetical protein.
  
     0.702
sce1131
Predicted nucleic acid-binding protein contains PIN domain.
  
     0.695
sce4360
Protein of unknown function.
  
     0.694
sce6759
Hypothetical protein; COG: ABC-type sugar transport systems, ATPase components.
  
     0.670
sce6252
Hypothetical protein predicted by Glimmer/Critica.
  
     0.668
sce5018
Hypothetical protein; Predicted ATPase.
  
     0.667
sce4233
Hypothetical protein.
  
     0.640
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.