STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce5147Hypothetical protein. (310 aa)    
Predicted Functional Partners:
sce2557
Putative secreted protein.
  
     0.717
sce9133
Putative secreted protein; Family membership.
  
     0.717
sce8208
CDP-diacylglycerol--serine O-phosphatidyltransferase.
  
     0.710
sce3465
Putative secreted protein.
  
     0.699
sce5866
Putative membrane protein.
  
     0.699
sce4975
Putative secreted protein.
  
     0.696
sce2039
Glutamyl endopeptidase; Family membership; Belongs to the peptidase S1B family.
  
     0.671
sce9258
Hypothetical protein.
  
     0.665
sce5401
Hypothetical protein.
  
     0.659
sce3217
Serine/threonine-protein kinase; Family membership.
  
     0.639
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.