STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kdgA2KDPG and KHG aldolase; High confidence in function and specificity. (213 aa)    
Predicted Functional Partners:
sce5155
Put. 2-Dehydro-3-deoxygluconokinase; Family membership.
 
 0.996
sce1240
Carbohydrate kinase, pfkB family; Family membership.
 
 0.982
aceB
Malate synthase; High confidence in function and specificity; Belongs to the malate synthase family.
     
 0.910
aceA
AceA protein; High confidence in function and specificity.
     
 0.907
sce0752
Putative glycolate oxidase; High confidence in function and specificity.
   
 
 0.906
glcD
D-lactate dehydrogenase.
   
 
 0.906
kdgA1
KdgA1 protein; High confidence in function and specificity.
  
  
 
0.905
sce0442
Serine-pyruvate aminotransferase; Family membership.
     
  0.900
glk
Glk protein; High confidence in function and specificity; Belongs to the bacterial glucokinase family.
  
 
 0.896
gap
Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); High confidence in function and specificity; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.864
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.