Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce5176Conserved hypothetical protein DUF181. (476 aa)    
Predicted Functional Partners:
sce5175
Amidohydrolase; Family membership.
 
     0.760
sce0541
Hypothetical protein.
 
  
 0.734
sce7123
Hypothetical protein.
 
  
 0.731
sce8752
Uncharaterized conserved protein; Function unclear.
 
  
 0.730
sce9073
Hypothetical protein.
 
  
 0.726
sce0790
Hypothetical protein.
 
  
 0.723
sce2512
Hypothetical protein.
  
  
 0.604
sce0660
Putative ABC transporter sodium permease; Family membership.
  
  
 0.603
noxC
Hypothetical protein; Nitroreductase.
 
  
 0.597
sce6023
Hypothetical protein; Nitroreductase.
 
  
 0.584
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.