Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sce5208Conserved hypothetical protein DUF820 domain; Uncharacterized protein conserved in cyanobacteria. (224 aa)    
Predicted Functional Partners:
sce4876
Hypothetical protein.
  
     0.661
sce5207
Protein kinase; Family membership.
       0.565
sce0956
Hypothetical protein.
  
     0.506
sce2144
Uncharacterized protein conserved in cyanobacteria.
  
     0.462
sce4237
Uncharacterized protein conserved in cyanobacteria.
  
     0.461
sce4360
Protein of unknown function.
  
     0.447
sce5012
Hypothetical protein.
  
     0.446
sce1131
Predicted nucleic acid-binding protein contains PIN domain.
  
     0.442
sce4139
Hypothetical protein predicted by Glimmer/Critica.
  
     0.426
sce4076
Similar to putative transposase.
  
     0.422
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.