STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce5511ABC transport system permease protein; Family membership. (260 aa)    
Predicted Functional Partners:
nrtC2
Putative sulfonate transport system ATP-binding protein.
  
 0.952
sce5512
ABC transport system substrate-binding protein; Family membership.
 
  
 0.919
ssuB-2
ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
  
 0.879
sce1865
ABC transporter ATP-binding protein; High confidence in function and specificity.
  
 0.870
nrtC1
Nitrate/nitrite ABC transporter ATP-binding protein; Specificity unclear.
  
 0.817
sce1324
ABC transporter ATP-binding protein; Specificity unclear.
  
 0.794
sce2759
ABC transporter ATP-binding protein; Specificity unclear.
  
 0.772
nrtD
Nitrate/nitrite ABC transporter ATP-binding protein; Specificity unclear.
  
 0.741
sce3377
ABC transport system ATP-binding protein; Specificity unclear.
  
 0.733
sce3376
ABC transport system substrate-binding protein; Specificity unclear.
 
  
 0.717
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.