STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce5587Hypothetical protein. (133 aa)    
Predicted Functional Partners:
sce3137
Hypothetical protein predicted by Glimmer/Critica.
  
     0.747
sce9331
Hypothetical protein.
  
     0.747
sce5676
Hypothetical protein.
  
     0.746
sce6578
Hypothetical protein.
  
     0.746
sce7473
Hypothetical protein.
  
     0.737
sce5132
Hypothetical protein.
  
     0.726
sce4561
Unknown protein.
  
     0.670
sce5586
Putative membrane protein.
 
     0.636
sce5012
Hypothetical protein.
  
     0.609
sce5011
Hypothetical protein.
  
     0.605
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.