STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubiE4Ubiquinone/menaquinone biosynthesis methyltransferase; Family membership. (267 aa)    
Predicted Functional Partners:
ubiE3
SAM-dependent methyltransferase.
  
     0.672
sce5286
Putative methyltransferase.
  
 
   0.657
sce0997
Putative SAM-dependent methyltransferse.
  
     0.636
sce6755
Methyltransferase; Family membership.
  
     0.629
sce6429
Putative SAM-dependent methyltransferase.
  
     0.556
sce4855
Probable methyltransferase; Family membership.
  
     0.551
sce7963
UbiE/COQ5 methyltransferase; Family membership.
  
     0.541
sce3453
SAM-dependent methyltransferase; Family membership.
  
     0.539
ubiG3
3-demethylubiquinone-9 3-O-methyltransferase.
  
     0.534
sce8995
Hypothetical protein; Family membership.
  
   
 0.507
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.