STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce5689Hypothetical protein. (343 aa)    
Predicted Functional Partners:
sce5687
Putative AAA family ATPase; Family membership.
       0.790
sce5688
Hypothetical protein.
       0.789
sce5686
Hypothetical protein.
       0.780
sce5685
Probable serine protease; Family membership; Belongs to the peptidase S1B family.
       0.773
moeB1
Molybdopterin synthase sulfurylase.
  
 
 0.611
sce5756
Putative adenylyltransferase.
  
 
 0.611
sce6022
Conserved domain protein.
  
 
 0.611
moeB2
Molybdopterin biosynthesis protein.
  
 
 0.611
sce7141
Hypothetical protein predicted by Glimmer/Critica.
  
 
 0.611
sce5690
FHA domain protein.
       0.487
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.