STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce5838Protein kinase; Family membership. (1816 aa)    
Predicted Functional Partners:
sce5837
Hypothetical protein.
       0.705
sce6826
Two-component hybrid sensor and regulator; Family membership.
 
0.683
sce3507
Two-component hybrid sensor and regulator; Family membership.
  
 
0.665
sce5836
Hypothetical protein.
       0.599
sce7807
Histidine kinase; Unnamed protein product; Family membership.
  
 
0.598
sce3989
Protein kinase; Family membership.
 
 
 
0.565
sce0713
Two-component hybrid sensor and regulator.
  
 
0.531
sce6827
Protein kinase; Family membership.
 
 
0.530
sce4190
Uncharacterized protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
 
0.526
sce7903
Hypothetical protein.
  
     0.526
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.