Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| fecA | sce2511 | sce5068 | sce2511 | TonB-dependent receptor protein; Specificity unclear. | Hypothetical protein. | 0.780 |
| fecA | sce3259 | sce5068 | sce3259 | TonB-dependent receptor protein; Specificity unclear. | Periplasmic protein TonB links inner and outer membranes. | 0.772 |
| fecA | sce5890 | sce5068 | sce5890 | TonB-dependent receptor protein; Specificity unclear. | Putative Iron-regulated protein A precursor; Family membership. | 0.448 |
| fecA | sce5892 | sce5068 | sce5892 | TonB-dependent receptor protein; Specificity unclear. | Outer membrane iron(III) dicitrate receptor; High confidence in function and specificity. | 0.495 |
| sce0254 | sce5892 | sce0254 | sce5892 | Unknown protein. | Outer membrane iron(III) dicitrate receptor; High confidence in function and specificity. | 0.400 |
| sce1805 | sce5892 | sce1805 | sce5892 | Hypothetical protein predicted by Glimmer/Critica. | Outer membrane iron(III) dicitrate receptor; High confidence in function and specificity. | 0.410 |
| sce2186 | sce5892 | sce2186 | sce5892 | Hypothetical protein predicted by Glimmer/Critica. | Outer membrane iron(III) dicitrate receptor; High confidence in function and specificity. | 0.400 |
| sce2511 | fecA | sce2511 | sce5068 | Hypothetical protein. | TonB-dependent receptor protein; Specificity unclear. | 0.780 |
| sce2511 | sce3259 | sce2511 | sce3259 | Hypothetical protein. | Periplasmic protein TonB links inner and outer membranes. | 0.846 |
| sce2511 | sce5890 | sce2511 | sce5890 | Hypothetical protein. | Putative Iron-regulated protein A precursor; Family membership. | 0.507 |
| sce2511 | sce5892 | sce2511 | sce5892 | Hypothetical protein. | Outer membrane iron(III) dicitrate receptor; High confidence in function and specificity. | 0.532 |
| sce3259 | fecA | sce3259 | sce5068 | Periplasmic protein TonB links inner and outer membranes. | TonB-dependent receptor protein; Specificity unclear. | 0.772 |
| sce3259 | sce2511 | sce3259 | sce2511 | Periplasmic protein TonB links inner and outer membranes. | Hypothetical protein. | 0.846 |
| sce3259 | sce5890 | sce3259 | sce5890 | Periplasmic protein TonB links inner and outer membranes. | Putative Iron-regulated protein A precursor; Family membership. | 0.509 |
| sce3259 | sce5892 | sce3259 | sce5892 | Periplasmic protein TonB links inner and outer membranes. | Outer membrane iron(III) dicitrate receptor; High confidence in function and specificity. | 0.545 |
| sce5890 | fecA | sce5890 | sce5068 | Putative Iron-regulated protein A precursor; Family membership. | TonB-dependent receptor protein; Specificity unclear. | 0.448 |
| sce5890 | sce2511 | sce5890 | sce2511 | Putative Iron-regulated protein A precursor; Family membership. | Hypothetical protein. | 0.507 |
| sce5890 | sce3259 | sce5890 | sce3259 | Putative Iron-regulated protein A precursor; Family membership. | Periplasmic protein TonB links inner and outer membranes. | 0.509 |
| sce5890 | sce5892 | sce5890 | sce5892 | Putative Iron-regulated protein A precursor; Family membership. | Outer membrane iron(III) dicitrate receptor; High confidence in function and specificity. | 0.781 |
| sce5890 | sce6925 | sce5890 | sce6925 | Putative Iron-regulated protein A precursor; Family membership. | Hypothetical protein. | 0.432 |
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