STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce6073Putative thiol-disulfide isomerase. (195 aa)    
Predicted Functional Partners:
pgk
Phosphoglycerate kinase; High confidence in function and specificity; Belongs to the phosphoglycerate kinase family.
      0.814
sce6072
Hypothetical protein predicted by Glimmer/Critica.
       0.773
kefC
Glutathione-regulated potassium-efflux system protein KefC; High confidence in function and specificity; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
    0.605
sce6074
Hypothetical protein; Predicted glycosyl hydrolase; Belongs to the glycosyl hydrolase 18 family.
       0.590
sce6071
Anti-anti sigma factor protein; Specificity unclear.
       0.533
sce6070
Hypothetical protein.
       0.463
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.