STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce6508Putative membrane protein. (282 aa)    
Predicted Functional Partners:
sce6507
Hypothetical protein.
 
    0.953
sce6503
Haloperoxidase-domain containing protein.
 
     0.949
sce6505
Putative membrane protein.
 
     0.924
sce6504
Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
 
     0.891
sce1105
Putative exported protein.
 
 
 0.802
sce6506
Hypothetical protein predicted by Glimmer/Critica.
       0.791
sce1107
Hypothetical protein.
  
   
 0.779
sce0395
Putative outer membrane protein.
 
 
 0.754
sce7969
Hypothetical protein; Family membership.
 
 
 0.737
sce6502
Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
     0.735
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (26%) [HD]