STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce6711Putative exported protein with glycine-rich central und C-terminal region. (548 aa)    
Predicted Functional Partners:
sce6712
Putative exported protein with glycine-rich central and C-terminal region.
 
 
  
0.750
sce2861
Dumpy.
  
 
   0.736
sce6710
Putative exported protein.
       0.732
sce8329
FHA domain protein.
  
     0.717
sce2981
Hypothetical protein.
  
     0.706
sce7834
Uncharacterized protein conserved in bacteria.
  
     0.702
sce4688
Hypothetical protein.
  
     0.685
sce1104
PE-PGRS family protein; Family membership.
  
     0.684
sce7180
Hypothetical protein.
  
     0.682
sce5241
Hypothetical protein.
  
    0.677
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.