STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce6774Glycosyltransferase; Specificity unclear. (394 aa)    
Predicted Functional Partners:
sce6771
NDP-sugar oxidoreductase similar to UDP-glucose 4-epimerase; Specificity unclear.
 
    0.954
sce6775
COG: Uncharacterized protein conserved in bacteria.
    0.954
sce6776
Uncharacterized protein conserved in bacteria.
 
    0.953
sce6777
Uncharacterized protein conserved in bacteria.
 
    0.952
sce6772
Sugar nucleotide epimerase; High confidence in function and specificity.
 
    0.951
sce6773
Hypothetical protein; Fe-S oxidoreductase.
 
     0.933
galE6
Probable UDP-glucose 4-epimerase; Family membership.
 
  
 0.844
sce8938
Uncharacterized protein conserved in bacteria.
    0.808
cgeB
Uncharacterized protein conserved in bacteria.
 
    0.798
sce6795
Glycosyltransferase-like conserved protein; Family membership.
 
    0.798
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.