STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce6786Hypothetical protein. (363 aa)    
Predicted Functional Partners:
sce6785
Uncharacterized low-complexity proteins.
 
    
0.841
sce6787
Hypothetical protein.
       0.782
sce6788
Hypothetical protein.
       0.773
sce5662
Hypothetical protein.
 
     0.767
sce4930
Hypothetical protein.
 
     0.764
sce8471
Hypothetical protein.
  
     0.753
sce8328
Uncharacterized protein conserved in bacteria.
  
     0.690
sce6784
Uncharacterized protein conserved in bacteria.
 
    0.679
sce8356
Uncharacterized protein conserved in bacteria.
  
     0.674
sce0109
Uncharacterized protein conserved in bacteria.
  
     0.666
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.