STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prkA2Protein kinase; Family membership. (685 aa)    
Predicted Functional Partners:
sce1772
Uncharacterized conserved protein involved in stress response; Function unclear; Belongs to the UPF0229 family.
  
 0.972
spoVR
Stage V sporulation protein R; High confidence in function and specificity.
 
  
 0.972
otsA
Alpha,alpha-trehalose-phosphate synthase (UDP-forming); High confidence in function and specificity.
   
    0.821
sce3268
Alpha,alpha-trehalose-phosphate synthase (UDP-forming); Family membership.
   
    0.821
dkgB
Putative 2,5-didehydrogluconate reductase; Family membership.
   
    0.738
glgA
Put. Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.590
glgA2
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.590
fba2
Fructose-bisphosphate aldolase; Family membership.
   
  
 0.578
katE
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
  
 0.572
phoH1
PhoH family protein; High confidence in function and specificity.
   
  
 0.571
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.