STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce7070Peptidylglycine alpha-amidating monooxygenase; Family membership. (439 aa)    
Predicted Functional Partners:
sce7740
Hypothetical protein predicted by Glimmer/Critica.
  
     0.752
sce2306
Hypothetical protein predicted by Glimmer/Critica.
  
     0.750
sce0977
Hypothetical protein; FOG: TPR repeat.
  
     0.739
sce7902
Hypothetical protein.
  
     0.714
sce8315
Hypothetical secreted peptidase.
  
     0.700
sce3130
Putative secreted protein.
  
     0.697
sce1332
Lysyl oxidase-like; Family membership.
  
     0.695
sce5460
Collagen alpha 2(I) chain precursor; Family membership.
  
     0.690
sce3827
Low-density lipoprotein receptor-related protein.
  
     0.688
sce2207
Slit homolog 3 protein precursor (Slit-3).
  
     0.671
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.