STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce7101Uncharacterized protein conserved in bacteria. (345 aa)    
Predicted Functional Partners:
sce7100
Hypothetical protein.
  
 0.994
sce7102
Hypothetical protein.
 
  
 0.948
sce0285
Uncharacterized protein conserved in bacteria.
 
  
 0.838
sce2254
Hypothetical protein.
  
  
 0.836
sce0102
Hypothetical protein.
 
  
 0.826
sce6456
Hypothetical protein; Transglutaminase-like enzymes putative cysteine proteases.
 
  
 0.826
sce0813
Transglutaminase-like enzymes, putative cysteine proteases; Family membership.
 
  
 0.815
sce4393
Hypothetical protein predicted by Glimmer/Critica.
  
  
 0.789
sce3303
Uncharacterized protein conserved in bacteria.
 
     0.666
sce7099
Response regulatory domain-containing protein; Unnamed protein product; Family membership.
       0.605
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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