Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
sce0102 | sce3303 | Hypothetical protein. | Uncharacterized protein conserved in bacteria. | 0.665 |
sce0102 | sce7100 | Hypothetical protein. | Hypothetical protein. | 0.835 |
sce0102 | sce7101 | Hypothetical protein. | Uncharacterized protein conserved in bacteria. | 0.826 |
sce0285 | sce3303 | Uncharacterized protein conserved in bacteria. | Uncharacterized protein conserved in bacteria. | 0.787 |
sce0285 | sce7100 | Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.833 |
sce0285 | sce7101 | Uncharacterized protein conserved in bacteria. | Uncharacterized protein conserved in bacteria. | 0.838 |
sce0285 | sce7102 | Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.429 |
sce0813 | sce3303 | Transglutaminase-like enzymes, putative cysteine proteases; Family membership. | Uncharacterized protein conserved in bacteria. | 0.607 |
sce0813 | sce7100 | Transglutaminase-like enzymes, putative cysteine proteases; Family membership. | Hypothetical protein. | 0.810 |
sce0813 | sce7101 | Transglutaminase-like enzymes, putative cysteine proteases; Family membership. | Uncharacterized protein conserved in bacteria. | 0.815 |
sce2254 | sce7101 | Hypothetical protein. | Uncharacterized protein conserved in bacteria. | 0.836 |
sce3303 | sce0102 | Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.665 |
sce3303 | sce0285 | Uncharacterized protein conserved in bacteria. | Uncharacterized protein conserved in bacteria. | 0.787 |
sce3303 | sce0813 | Uncharacterized protein conserved in bacteria. | Transglutaminase-like enzymes, putative cysteine proteases; Family membership. | 0.607 |
sce3303 | sce6456 | Uncharacterized protein conserved in bacteria. | Hypothetical protein; Transglutaminase-like enzymes putative cysteine proteases. | 0.563 |
sce3303 | sce7100 | Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.678 |
sce3303 | sce7101 | Uncharacterized protein conserved in bacteria. | Uncharacterized protein conserved in bacteria. | 0.666 |
sce3303 | sce7102 | Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.477 |
sce4393 | sce7101 | Hypothetical protein predicted by Glimmer/Critica. | Uncharacterized protein conserved in bacteria. | 0.789 |
sce6456 | sce3303 | Hypothetical protein; Transglutaminase-like enzymes putative cysteine proteases. | Uncharacterized protein conserved in bacteria. | 0.563 |
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