STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce7191PE-PGRS family protein; Family membership. (611 aa)    
Predicted Functional Partners:
sce7189
Putative exported alanine/arginine/valine-rich protein.
 
     0.811
sce5929
Hypothetical protein.
  
     0.753
sce4558
Hypothetical protein.
  
     0.746
sce2861
Dumpy.
  
 
   0.745
sce2548
Hypothetical protein.
  
     0.741
sce8733
Putative secreted protein.
  
     0.732
sce6575
Putative membrane protein.
  
    0.730
sce3776
Hypothetical protein.
  
     0.719
sce9256
Putative secreted protein.
  
     0.713
sce4475
Hypothetical protein ZK84.1.
  
     0.709
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.