STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce7214Two component sensor kinase; Family membership. (520 aa)    
Predicted Functional Partners:
sce8433
Two-component response regulator; Family membership.
 
 
   0.961
sce3988
Unnamed protein product; Family membership.
 
   0.921
sce7217
Unnamed protein product; Family membership.
 
 0.918
sce5100
Two-component hybrid histidine kinase; Family membership.
 
 
 
0.898
sce2847
Response regulator/GGDEF domain protein; Family membership.
 
 
 
 0.893
sce7215
Two-component system sensor protein; Family membership.
 
 
  
0.870
sce5570
Unnamed protein product; Family membership.
 
   0.852
sce8150
Two-component response regulator; Family membership.
 
 
 0.839
sce3998
Unnamed protein product; Family membership.
   0.830
sce1938
Two-component response regulator; Family membership.
 
 
 0.823
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.