STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce7248Putative MglB protein. (160 aa)    
Predicted Functional Partners:
sce7249
Putative MglA1 protein; Family membership.
 
 
 0.998
sce1492
Gliding motility protein.
 
 
 0.995
sce0386
GTPase SAR1 and related small G proteins.
 
 
 0.982
sce2413
Gliding motility protein; Family membership.
 
 
 0.979
sce6926
Hypothetical protein.
  
     0.772
sce3653
Hypothetical protein.
  
     0.767
sce8153
Hypothetical protein.
  
     0.758
sce6447
Hypothetical protein; FOG: TPR repeat.
  
     0.754
sce2957
Hypothetical protein; FOG: Glucan-binding domain (YG repeat).
  
     0.731
pilM
Tfp pilus assembly protein, ATPase PilM.
  
     0.662
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.