STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce7256Putative protein phosphatase. (245 aa)    
Predicted Functional Partners:
sce1765
Hypothetical protein; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases.
  
     0.766
sce2818
Putative Nucleoside-triphosphatase; Family membership.
  
  
 0.552
sce3078
Hydrolases acting on phosphorous-containinganhydrides; Family membership.
  
  
 0.552
yggV
Putative ribosomal protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
  
  
 0.552
sce3864
Hypothetical protein predicted by Glimmer/Critica.
  
     0.479
sce7605
Hypothetical protein; Predicted metal-dependent membrane protease.
 
     0.438
sce7255
Hypothetical protein predicted by Glimmer/Critica.
       0.430
sce2921
Tetratricopeptide repeat protein.
 
 
   0.426
sce2461
Two-component system sensor protein; Family membership.
  
    0.412
gspJ
Putative general secretion pathway protein J; Specificity unclear.
  
     0.407
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.