STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce7485Hypothetical protein. (337 aa)    
Predicted Functional Partners:
sce2683
Hypothetical protein.
  
     0.775
sce6213
DUF323 hypothetical protein.
  
     0.775
sce6217
Hypothetical protein.
  
     0.775
sce0826
Hypothetical protein.
  
     0.774
sce9290
Hypothetical protein.
  
     0.773
sce8169
Hypothetical protein.
  
     0.729
sce1095
Putative secreted protein.
  
     0.708
sce2561
Hypothetical protein.
  
     0.685
sce3784
Hypothetical protein.
  
     0.685
sce4329
Hypothetical protein.
  
     0.627
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.