STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce7815Hypothetical protein. (227 aa)    
Predicted Functional Partners:
parB
Chromosome partitioning protein ParB; High confidence in function and specificity; Belongs to the ParB family.
 
 
 0.943
parA4
Chromosome partitioning protein ParA; Specificity unclear.
  
   
 0.787
parA1
Chromosome partitioning protein; High confidence in function and specificity.
  
   
 0.786
sce7814
Hypothetical protein predicted by Glimmer/Critica.
       0.773
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
 
 
 0.556
sce7984
Cell division protein fragment; Family membership; Belongs to the FtsK/SpoIIIE/SftA family.
  
  
 0.546
sce7813
Response regulatory domain-containing protein; Unnamed protein product; Family membership.
   
   0.539
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
  
 0.522
sce7816
Hypothetical protein.
       0.477
gidB
Putative glucose-inhibited division protein; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
 
  
 0.441
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.