STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce8052Sensor histidine kinase; Family membership. (433 aa)    
Predicted Functional Partners:
sce8051
Response regulator receiver domain.
 0.997
sce7597
Putative two component system response regulator.
  
 
  0.974
sce7596
Putative two component system, histidine kinase.
  
 
 
0.929
sce1417
Two-component system, response regulator; Family membership.
  
 
  0.919
sce8800
Response regulatory domain-containing protein; Unnamed protein product; Family membership.
    
  0.903
sce5100
Two-component hybrid histidine kinase; Family membership.
   
 
0.861
sce6826
Two-component hybrid sensor and regulator; Family membership.
 
 
 0.804
sce3507
Two-component hybrid sensor and regulator; Family membership.
 
 
 0.790
sce8050
Glycosyl hydrolase; Family membership.
       0.773
sce5484
Two component sensor kinase; Family membership.
  
 
   0.597
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.