STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsC4Ribose ABC transporter permease protein; Specificity unclear; Belongs to the binding-protein-dependent transport system permease family. (351 aa)    
Predicted Functional Partners:
rbsA2
Ribose transport ATP-binding protein; High confidence in function and specificity.
 0.997
rbsB2
Ribose transporter, periplasmic binding protein; High confidence in function and specificity.
 
 0.988
rbsA1
Ribose transport ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.986
sce3101
ABC transporter, nucleotide binding/ATPase protein; Specificity unclear.
 0.983
rbsC3
Ribose ABC transporter permease protein; Specificity unclear; Belongs to the binding-protein-dependent transport system permease family.
    
0.983
sce3323
Sugar ABC transporter ATP-binding protein; Specificity unclear.
 0.981
sce3322
Put. D-ribose-binding periplasmic protein; Specificity unclear.
 0.979
sce3102
ABC-type sugar transport system, periplasmic component; Specificity unclear.
 
 0.973
rbsB1
Ribose transporter, periplasmic binding protein; High confidence in function and specificity.
 
 0.973
sce2220
LACI-type transcriptional regulator; Specificity unclear.
 
 0.967
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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