STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce8511Uncharacterized protein conserved in bacteria. (818 aa)    
Predicted Functional Partners:
sce4846
Uncharacterized protein conserved in bacteria.
 
  
 0.919
sce4998
Uncharacterized protein conserved in bacteria.
 
  
 0.854
sce9337
Hypothetical protein; Function unclear.
 
  
 0.854
sce4982
Uncharacterized protein conserved in bacteria.
 
  
 0.850
sce9342
Uncharacterized protein conserved in bacteria.
 
  
 0.850
sce8512
Uncharacterized protein conserved in bacteria.
 
     0.844
sce4986
Uncharacterized protein conserved in bacteria.
 
  
 0.821
sce9345
Hypothetical protein predicted by Glimmer/Critica.
 
  
 0.811
sce1251
Uncharacterized protein conserved in bacteria.
 
  
 0.803
sce4981
Uncharacterized protein conserved in bacteria.
 
  
 0.803
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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