Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
sce1104 | sce2046 | sce1104 | sce2046 | PE-PGRS family protein; Family membership. | Hypothetical protein. | 0.755 |
sce1104 | sce2836 | sce1104 | sce2836 | PE-PGRS family protein; Family membership. | Putative membrane protein. | 0.705 |
sce1104 | sce2840 | sce1104 | sce2840 | PE-PGRS family protein; Family membership. | Hypothetical protein; COG: ATP-dependent nuclease, subunit B. | 0.422 |
sce1104 | sce5929 | sce1104 | sce5929 | PE-PGRS family protein; Family membership. | Hypothetical protein. | 0.505 |
sce1104 | sce7132 | sce1104 | sce7132 | PE-PGRS family protein; Family membership. | Putative membrane protein. | 0.555 |
sce1104 | sce7189 | sce1104 | sce7189 | PE-PGRS family protein; Family membership. | Putative exported alanine/arginine/valine-rich protein. | 0.751 |
sce1104 | sce7317 | sce1104 | sce7317 | PE-PGRS family protein; Family membership. | Hypothetical protein predicted by Glimmer/Critica. | 0.772 |
sce1104 | sce9256 | sce1104 | sce9256 | PE-PGRS family protein; Family membership. | Putative secreted protein. | 0.753 |
sce1104 | wzx2 | sce1104 | sce2479 | PE-PGRS family protein; Family membership. | Putative oligosaccharyl transferase; Function unclear. | 0.734 |
sce2046 | sce1104 | sce2046 | sce1104 | Hypothetical protein. | PE-PGRS family protein; Family membership. | 0.755 |
sce2046 | sce2836 | sce2046 | sce2836 | Hypothetical protein. | Putative membrane protein. | 0.772 |
sce2046 | sce2840 | sce2046 | sce2840 | Hypothetical protein. | Hypothetical protein; COG: ATP-dependent nuclease, subunit B. | 0.716 |
sce2046 | sce4535 | sce2046 | sce4535 | Hypothetical protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.682 |
sce2046 | sce5929 | sce2046 | sce5929 | Hypothetical protein. | Hypothetical protein. | 0.675 |
sce2046 | sce7132 | sce2046 | sce7132 | Hypothetical protein. | Putative membrane protein. | 0.775 |
sce2046 | sce7189 | sce2046 | sce7189 | Hypothetical protein. | Putative exported alanine/arginine/valine-rich protein. | 0.740 |
sce2046 | sce7317 | sce2046 | sce7317 | Hypothetical protein. | Hypothetical protein predicted by Glimmer/Critica. | 0.763 |
sce2046 | sce9256 | sce2046 | sce9256 | Hypothetical protein. | Putative secreted protein. | 0.752 |
sce2046 | wzx2 | sce2046 | sce2479 | Hypothetical protein. | Putative oligosaccharyl transferase; Function unclear. | 0.771 |
sce2836 | sce1104 | sce2836 | sce1104 | Putative membrane protein. | PE-PGRS family protein; Family membership. | 0.705 |
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