STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce9323Hypothetical protein predicted by Glimmer/Critica. (259 aa)    
Predicted Functional Partners:
sce9322
Transcriptional regulator, MarR family; Family membership.
  
    0.777
ilvB1
Acetolactate synthase large subunit; Belongs to the TPP enzyme family.
  
  
 0.610
sce2120
Pyruvate oxidase; High confidence in function and specificity; Belongs to the TPP enzyme family.
  
  
 0.610
ilvB2
Acetolactate synthase; Family membership.
  
  
 0.610
sce5045
Hypothetical protein.
  
  
 0.610
sce7307
TPP_enzyme_C domain-containing protein; Unnamed protein product; Family membership.
  
  
 0.610
ilvG1
Putative Acetolactate synthase; Family membership; Belongs to the TPP enzyme family.
  
  
 0.610
ilvG2
Acetolactate synthase; Family membership; Belongs to the TPP enzyme family.
  
  
 0.610
sce8946
Hypothetical protein predicted by Glimmer/Critica.
  
  
 0.610
mobA
Putative molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
       0.538
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.