STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sce9343Uncharacterized protein conserved in bacteria. (350 aa)    
Predicted Functional Partners:
sce9342
Uncharacterized protein conserved in bacteria.
 
  
 0.984
sce9340
Hemolysin-coregulated protein (uncharacterized).
 
  
 0.978
sce9337
Hypothetical protein; Function unclear.
 
  
 0.975
sce4846
Uncharacterized protein conserved in bacteria.
 
  
 0.972
sce4998
Uncharacterized protein conserved in bacteria.
 
  
 0.967
sce9341
Uncharacterized protein conserved in bacteria.
 
  
 0.951
sce9344
Uncharacterized protein conserved in bacteria.
 
  
 0.945
sce9345
Hypothetical protein predicted by Glimmer/Critica.
 
  
 0.944
sce9346
Uncharacterized protein conserved in bacteria.
 
  
 0.942
sce1251
Uncharacterized protein conserved in bacteria.
 
  
 0.911
Your Current Organism:
Sorangium cellulosum So ce56
NCBI taxonomy Id: 448385
Other names: S. cellulosum So ce56, Sorangium cellulosum DSM 53796, Sorangium cellulosum str. So ce56, Sorangium cellulosum strain So ce56
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