STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_10749Serine/threonine-protein kinase shk2. (261 aa)    
Predicted Functional Partners:
BWQ96_10404
Septum-promoting GTP-binding protein 1.
    
 0.732
BWQ96_08267
E3 ubiquitin-protein ligase MIB2.
   
 0.644
BWQ96_10096
Mesenchyme-specific cell surface glycoprotein.
    
 0.620
BWQ96_07724
Putative ubiquitin-conjugating enzyme protein 17.
    
 0.592
BWQ96_00305
Protein NBR1-like.
    
  0.569
BWQ96_03406
Mitogen-activated protein kinase kinase 3.
   
 0.564
BWQ96_01179
Mitogen-activated protein kinase kinase 1.
   
 0.564
BWQ96_00151
Cell division control protein 42-like.
    
 0.553
BWQ96_04532
Serine/threonine-protein kinase svkA.
    
 0.533
BWQ96_06060
E3 ubiquitin-protein ligase COP1.
    
  0.531
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.