STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_10610Beta,beta-carotene 9',10'-oxygenase. (62 aa)    
Predicted Functional Partners:
BWQ96_02287
Xanthine dehydrogenase.
     
 0.476
BWQ96_07195
Patatin-like phospholipase domain-containing protein 4.
     
 0.453
BWQ96_00151
Cell division control protein 42-like.
    
  0.441
BWQ96_08764
Squalene synthase.
     
 0.438
BWQ96_03389
All-trans-phytoene synthase.
     
 0.438
BWQ96_09383
Aldehyde dehydrogenase, dimeric NADP-preferring.
     
 0.431
BWQ96_01006
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.431
BWQ96_04420
O-acyltransferase.
   
 
  0.426
BWQ96_02298
Endoplasmic reticulum metallopeptidase 1.
   
 
  0.426
BWQ96_04979
APH domain-containing protein.
   
 
 0.404
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.