STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_10464GTP-binding protein TypA/BipA-like. (659 aa)    
Predicted Functional Partners:
BWQ96_01196
30S ribosomal protein S6.
   
 
 0.727
BWQ96_05611
60S ribosomal protein L5.
   
 
 0.723
BWQ96_06555
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.714
BWQ96_05696
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
   
 
 0.712
BWQ96_01340
40S ribosomal protein S14-3; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.709
BWQ96_07175
40S ribosomal protein S3-B; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.707
BWQ96_03673
37S ribosomal protein S9, mitochondrial; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.705
BWQ96_01341
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.704
BWQ96_04060
50S ribosomal protein L19.
  
   0.696
BWQ96_05339
30S ribosomal protein S16-1, chloroplastic.
  
   0.691
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.