STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_09954Ankyrin-2. (302 aa)    
Predicted Functional Partners:
BWQ96_07877
Putative serine/threonine-protein kinase.
    
 0.991
BWQ96_01954
Protein lap1.
    
 0.915
BWQ96_08900
Putative CDP-alcohol phosphatidyltransferase class-I family protein.
    
 0.836
BWQ96_05483
Glycerophosphodiester phosphodiesterase GDE1.
    
 0.835
BWQ96_07724
Putative ubiquitin-conjugating enzyme protein 17.
   
 0.750
BWQ96_08391
Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1.
   
 0.744
BWQ96_04664
Signal peptide, CUB and EGF-like domain-containing protein 3.
   
 0.744
BWQ96_10602
Acyl-CoA-binding domain-containing protein 1.
  
 
  0.668
BWQ96_03526
Uncharacterized protein.
    
 0.664
BWQ96_10540
ANK_REP_REGION domain-containing protein.
  
 
 0.656
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.