STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BWQ96_09879Exosome complex component rrp4. (201 aa)    
Predicted Functional Partners:
BWQ96_07107
Putative exosome complex component rrp40.
   
 0.905
BWQ96_06196
Exosome complex component rrp45.
   
 0.890
BWQ96_00787
Exosome complex component CSL4.
   
 0.887
BWQ96_08624
Exosome complex exonuclease RRP42.
   
 0.867
BWQ96_08849
Exosome component 10.
   
 0.825
BWQ96_01188
Nuclear nucleic acid-binding protein C1D.
   
 0.819
BWQ96_08001
Exosome complex component RRP43.
   
 0.817
BWQ96_06937
HBS1-like protein.
    
 0.777
BWQ96_07428
Exosome complex component RRP41.
   
 0.761
BWQ96_01053
Exosome complex component RRP41-like.
   
 0.761
Your Current Organism:
Gracilariopsis chorda
NCBI taxonomy Id: 448386
Other names: G. chorda, Gracilaria chorda
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.